Incidence (epidemiology)
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Incidence in epidemiology is a measure of the probability of occurrence of a given medical condition in a population within a specified period of time. Although sometimes loosely expressed simply as the number of new cases during some time period, it is better expressed as a proportion or a rate^{[1]} with a denominator.
Incidence proportion (also known as cumulative incidence) is the number of new cases within a specified time period divided by the size of the population initially at risk. For example, if a population initially contains 1,000 nondiseased persons and 28 develop a condition over two years of observation, the incidence proportion is 28 cases per 1,000 persons per two years, i.e. 2.8% per two years.
Incidence rate
The incidence rate is the number of new cases per population at risk in a given time period.^{[2]} When the denominator is the sum of the persontime of the at risk population, it is also known as the incidence density rate or persontime incidence rate.^{[3]} In the same example as above, the incidence rate is 14 cases per 1000 personyears, because the incidence proportion (28 per 1,000) is divided by the number of years (two). Using persontime rather than just time handles situations where the amount of observation time differs between people, or when the population at risk varies with time.^{[4]} Use of this measure implies the assumption that the incidence rate is constant over different periods of time, such that for an incidence rate of 14 per 1000 personsyears, 14 cases would be expected for 1000 persons observed for 1 year or 50 persons observed for 20 years.^{[5]}
When this assumption is substantially violated, such as in describing survival after diagnosis of metastatic cancer, it may be more useful to present incidence data in a plot of cumulative incidence, over time, taking into account loss to followup, using a KaplanMeier Plot.
Consider the following example. Say you are looking at a sample population of 225 people, and want to determine the incidence rate of developing HIV over a 10year period:
 At the beginning of the study (t=0) you find 25 cases of existing HIV. These people are not counted as they cannot develop HIV a second time.
 A followup at 5 years (t=5 years) finds 20 new cases of HIV.
 A second followup at the end of the study (t=10 years) finds 30 new cases.
If you were to measure prevalence you would simply take the total number of cases (25 + 20 + 30 = 75) and divide by your sample population (225). So prevalence would be 75/225 = 0.33 or 33% (by the end of the study). This tells you how widespread HIV is in your sample population, but little about the actual risk of developing HIV for any person over a coming year.
To measure incidence you must take into account how many years each person contributed to the study, and when they developed HIV. When it is not known exactly when a person develops the disease in question, epidemiologists frequently use the actuarial method, and assume it was developed at a halfway point between followups. In this calculation:
 At 5 yrs you found 20 new cases, so you assume they developed HIV at 2.5 years, thus contributing (20 * 2.5) =50 personyears of diseasefree life.
 At 10 years you found 30 new cases. These people did not have HIV at 5 years, but did at 10, so you assume they were infected at 7.5 years, thus contributing (30 * 7.5)= 225 personyears of diseasefree life. That is a total of (225 + 50)= 275 person years so far.
 You also want to account for the 150 people who never had or developed HIV over the 10year period, (150 * 10) contributing 1500 personyears of diseasefree life.
That is a total of (1500 + 275 + 50) = 1825 personyears of life. Now take the 50 new cases of HIV, and divide by 1825 to get 0.027, or 27 cases of HIV per 1000 population, per year. In other words, if you were to follow 1000 people for one year, you would see 27 new cases of HIV.
This is a much more accurate measure of risk than prevalence.
Incidence vs. prevalence
Incidence should not be confused with prevalence, which is the proportion of cases in the population at a given time rather than rate of occurrence of new cases. Thus, incidence conveys information about the risk of contracting the disease, whereas prevalence indicates how widespread the disease is. Prevalence is the proportion of the total number of cases to the total population and is more a measure of the burden of the disease on society with no regard to time at risk or when subjects may have been exposed to a possible risk factor. Prevalence can also be measured with respect to a specific subgroup of a population (see: denominator data). Incidence is usually more useful than prevalence in understanding the disease etiology: for example, if the incidence rate of a disease in a population increases, then there is a risk factor that promotes the incidence.
For example, consider a disease that takes a long time to cure and was widespread in 2002 but dissipated in 2003. This disease will have both high incidence and high prevalence in 2002, but in 2003 it will have a low incidence yet will continue to have a high prevalence (because it takes a long time to cure, so the fraction of individuals that are affected remains high). In contrast, a disease that has a short duration may have a low prevalence and a high incidence. When the incidence is approximately constant for the duration of the disease, prevalence is approximately the product of disease incidence and average disease duration, so prevalence = incidence × duration. The importance of this equation is in the relation between prevalence and incidence; for example, when the incidence increases, then the prevalence must also increase. Note that this relation does not hold for agespecific prevalence and incidence, where the relation becomes more complicated.^{[6]}
See also
References
 ^ "incidence" at Dorland's Medical Dictionary
 ^ Rothman, Kenneth J., Lash, Timothy L., Greenland, Sander. Modern Epidemiology. ISBN 9780781755641 ISBN 0781755646>"incidence rate" at Dorland's Medical Dictionary
 ^ Last, John M., ed. (2001). A Dictionary of Epidemiology (4 ed.). New York, NY: Oxford University Press. ISBN 0195141695.
 ^ Coggon D, Rose G, Barker DJ (1997). "Quantifying diseases in populations". Epidemiology for the Uninitiated (4th ed.). BMJ. ISBN 0727911023.
 ^ Dunn, Olive Jean; Clark, Virginia A. (2009). Basic statistics: a primer for the biomedical sciences (4th ed.). Hoboken, N.J.: John Wiley & Sons. pp. 3–5. ISBN 9780470496855. Retrieved 9 May 2016.
 ^ Brinks R (2011) "A new method for deriving incidence rates from prevalence data and its application to dementia in Germany", arXiv:1112.2720
External links
 Calculation of standardized incidence rate
 PAMCOMP PersonYears Analysis and Computation Programme for calculating standardized incidence rates (SIRs)